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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs3818936 chr6:24427281 G/T 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs3827641 chr6:24425467 A/G 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs3828361 chr3:122102710 T/C 8.76E-7 486 16.37 15.43 5.93 KM Plot
THCA rs3832421 chr6:26205939 A/AG 2.31E-8 486 15.27 17.12 4.75 KM Plot
THCA rs3833457 chr6:24423149 C/CTG 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs3833579 chr2:241517847 CAG/C 1.77E-11 485 15.9 15 19.27 KM Plot
THCA rs3833580 chr2:241525599 GA/G 2.17E-11 483 15.9 15.42 19.27 KM Plot
THCA rs3839183 chr4:110745347 CT/C 0.000138 479 16.57 15.63 14.47 KM Plot
THCA rs3846834 chr6:24462446 G/A 3.5E-7 478 16.6 14.93 7.43 KM Plot
THCA rs3848252 chr16:20718939 C/T 3.38E-5 490 16.38 14.47 17.65 KM Plot
THCA rs3848254 chr16:20728166 C/T 3.4E-5 489 16.37 14.67 17.65 KM Plot
THCA rs3851973 chr2:201732878 A/G 0 481 16.4 15 2.47 KM Plot
THCA rs3857781 chr7:75875904 G/A 0.000115 486 16.22 16.62 11.77 KM Plot
THCA rs3882892 chr11:112014986 C/T 2.92E-5 483 16.4 16.07 11.38 KM Plot
THCA rs3889823 chr10:81918362 T/C 0.000128 485 15.78 17.23 9.77 KM Plot